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Hiroki Tagato a6233e5a2f */*: switch dependency from devel/py-lxml5 to devel/py-lxml 
Currently, there are two versions of python XML processing library
which conflict each other in the ports tree, namely:
- devel/py-lxml5 (now at version 5.4.0)
- devel/py-lxml  (now at version 6.0.1)

To avoid the situation that some ports depend on py-lxml5 and some
others do on py-lxml (by switching dependencies individually), this
commit switches the dependencies from py-lxml5 to py-lxml at once.

Additional note: There are still two ports (textproc/py-rdflib and
www/py-draftjs-exporter) depending on py-lxml5 since they limit upper
version to less than 6.

PR:		289491
Approved by:	Michiel van Baak Jansen <michiel@vanbaak.eu>, arrowd,
		crees, madpilot, delphij, marcus, nivit, kai,
		skreuzer, fluffy, bofh, thierry, stephen, sunpoet,
		0mp, Eric Camachat <eric@camachat.org>
 		2025-09-15 22:55:40 +09:00
..
2d-rewriter
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ALPSCore
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ChipmunkPhysics
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InsightToolkit
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InsightToolkit501
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PETSc
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R-cran-DCluster
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R-cran-Epi
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R-cran-FAdist
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R-cran-bayesm
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R-cran-cmprsk
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R-cran-e1071
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R-cran-epicalc
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R-cran-etm
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R-cran-fastICA
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R-cran-kernlab
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R-cran-ks
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R-cran-snow
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R-cran-som
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R-cran-udunits2
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abinit science/abinit: update 10.4.5 → 10.4.7 2025-09-07 15:23:01 -07:00
acados
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afni science/afni: Update to 25.2.09 2025-08-25 20:14:45 +02:00
agrum all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
aircraft-datcom
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antioch
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apbs
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arbor *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
ascent
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atompaw science/atompaw: Fix building with Flang 2025-09-05 17:34:12 +03:00
avogadro2
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avogadrolibs
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axom *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
bagel
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bddsolve
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berkeleygw science/berkeleygw: Constrain to gfortran 2025-09-05 17:34:12 +03:00
bodr
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bout++ all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
bout++-merging-filaments all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
buddy
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cantera all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
cardioid
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cdf science/cdf: improve and lint port 2025-09-09 02:10:52 +04:00
cdk
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cdo science/cdo: Update to 2.5.3 2025-09-03 02:00:30 +08:00
cgnslib science/cgnslib: Fix building with Flang 2025-09-06 23:01:19 +03:00
cgribex
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checkmol
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chemical-mime-data
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chemicalfun *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
chemps2
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chemtool
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chemtool-devel
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chimes-calculator
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chrono
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cif-tools
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clhep
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clipper
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code_saturne all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
colt
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conduit
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coordgenlibs
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cp2k
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cp2k-data
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csvtk many: Bump go ports for go-1.24.7 2025-09-04 13:53:24 -04:00
dakota
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dalton
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dd_package
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devisor
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dftbplus
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dftd3
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dftd4
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dimod
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dirac
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dkh
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dlib-cpp
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drawxtl
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dssp
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dwave-preprocessing
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dynare */*: chase the upgrade to SuiteSparse 2025-08-01 23:08:37 +02:00
eccodes
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elk
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elmerfem
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epte
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erd
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ergo
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erkale
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erkale-pseudopotentials
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fastcap
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fasthenry
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fastjet science/fastjet: update 3.4.3 → 3.5.1 2025-08-22 14:12:21 -07:00
feff10 science/feff10: Fix building with Flang 2025-09-14 13:18:01 +03:00
fleur
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frontistr
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fsom
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fvcom
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fvcom-mpi
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gabedit
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gamess-us
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gbtolib
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gchemutils
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gcp
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gdma
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geant4
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gemmi
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getdp
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ghemical
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ghmm
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gnudatalanguage all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
gpaw-setups
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gramps science/gramps: Update to 6.0.5 2025-09-07 23:18:15 +01:00
gromacs
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gsmc
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h5utils
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h5z-zfp
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harminv
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hdf
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hdf5
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hdf5-18
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hdf5-110
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healpix
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helfem
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hepmc3
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highfive
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hypre */*: Bump dependencies for math/superlu update 5.3.0 => 7.0.1 2025-08-03 21:59:41 +04:00
iboview
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isaac-cfd
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jdftx
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jmol
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jstrack
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kalzium KDE: Update KDE Gear to 25.08.1 2025-09-13 15:45:52 +03:00
kim-api science/kim-api: update 2.3.0 → 2.4.1 2025-09-06 00:18:59 -07:00
kplib
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kst2
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lammps
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lamprop
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latte
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libaec
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libccp4
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libcifpp
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libcint science/libcint: update 6.1.2 → 6.1.3 2025-08-19 02:39:04 -07:00
libctl
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libecpint
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libefp
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libgetar
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libghemical
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libgridxc
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libint
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libint2
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libint2-psi4
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libkml
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liblinear
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libmbd
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libmsym
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libnegf
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liboglappth
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libpsml
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libquantum
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libssm
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libsvm
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libsvm-python
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libvdwxc
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libxc
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liggghts
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linearelasticity
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linux-ai-ml-env
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linux-zotero
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luscus
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m-aneos
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madness
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maeparser
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massxpert
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mbdyn */*: chase the upgrade to SuiteSparse 2025-08-01 23:08:37 +02:00
mcpl science/mcpl: not for 32 bit architectures 2025-08-16 21:17:27 +02:00
mcstas
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mcstas-comps
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mctc-lib
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mcxtrace
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mcxtrace-comps
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mdynamix
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medit
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meep all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
metaphysicl
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minc2
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mmdb2
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mmg
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mmtf-cpp
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mol2ps
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molgif many: Bump go ports for go-1.24.7 2025-09-04 13:53:24 -04:00
molscript
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molsketch
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mopac
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mp2d
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mpb
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mpqc
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mrchem
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mrcpp
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msms
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mstore
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multicharge
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multiwfn
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mutationpp
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namd
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ncrystal science/{,py-}ncrystal: update 4.2.6 → 4.2.8 2025-08-07 07:12:32 -07:00
nest
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netcdf
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netcdf-cxx
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netcdf-fortran
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nifticlib
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nlcglib
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nwchem
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nwchem-data
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ocean
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octopus
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openbabel
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openems
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openkim-models
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openmc *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
openmodelica science/openmodelica: update 1.25.2 → 1.25.4 2025-09-12 02:00:02 -07:00
openmolcas
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openmx
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opensim-core
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opensph *: Bump PORTREVISION for math/Imath update 2025-08-10 21:02:44 +02:00
opsin
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optench
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orthanc
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orthanc-dicomweb
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orthanc-mysql
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orthanc-postgresql
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orthanc-webviewer
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p5-Chemistry-3DBuilder
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p5-Chemistry-Bond-Find
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p5-Chemistry-Canonicalize
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p5-Chemistry-Elements
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p5-Chemistry-File-MDLMol
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p5-Chemistry-File-Mopac
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p5-Chemistry-File-PDB
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p5-Chemistry-File-SLN
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p5-Chemistry-File-SMARTS
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p5-Chemistry-File-SMILES
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p5-Chemistry-File-VRML
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p5-Chemistry-File-XYZ
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p5-Chemistry-FormulaPattern
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p5-Chemistry-InternalCoords
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p5-Chemistry-Isotope
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p5-Chemistry-MacroMol
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p5-Chemistry-MidasPattern
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p5-Chemistry-Mok
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p5-Chemistry-Mol
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p5-Chemistry-OpenSMILES
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p5-Chemistry-Pattern
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p5-Chemistry-Reaction
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p5-Chemistry-Ring
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p5-Geo-BUFR
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p5-Geo-Calc
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p5-Geo-Coordinates-Converter
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p5-Geo-Coordinates-Converter-iArea
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p5-Geo-Coordinates-Transform
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p5-Geo-WebService-Elevation-USGS
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p5-Mcstas-Tools
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p5-PerlMol
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p5-Physics-Unit
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packmol science/packmol: Update to 21.1.0 2025-08-20 16:36:17 +01:00
pagmo2
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paje GNUstep: Bump dependent PORTREVISION 2025-08-12 08:03:53 -03:00
paraview all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
parthenon
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pastix
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pcmsolver
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phonopy
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plumed
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pnetcdf science/pnetcdf: Update to 1.14.1 2025-09-08 07:03:19 +08:00
polytope
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precice
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psi4 all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
pulseview
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py-GPy
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py-GPyOpt
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py-HepMC3
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py-HofstadterTools all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-MDAnalysis all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-MDAnalysisTests all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-OpenFermion all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-OpenFermion-Dirac all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-OpenFermion-PySCF all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-OpenMC */*: switch dependency from devel/py-lxml5 to devel/py-lxml 2025-09-15 22:55:40 +09:00
py-PubChemPy
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py-PyFR
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py-PyNE all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-SimpleSpectral
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py-abipy all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-access
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py-arbor
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py-arch
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py-asap3 all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-asdf science/py-asdf: Update to 4.4.0 2025-09-08 07:04:06 +08:00
py-asdf-standard science/py-asdf-standard: Update to 1.4.0 2025-09-08 07:04:06 +08:00
py-asdf-transform-schemas
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py-ase science/py-ase: update 3.23.0 → 3.26.0 2025-09-06 00:19:00 -07:00
py-atomium
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py-avogadrolibs
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py-boutdata all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-boututils all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-cdo
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py-cfgrib
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py-chainer
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py-chainer-chemistry all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-chempy all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-cirq-aqt all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-cirq-core all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-cirq-google
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py-cirq-ionq all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-cirq-pasqal all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-cirq-rigetti all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-coards
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py-dftbplus
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py-dftd4
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py-dimod
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py-dipy
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py-dlib
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py-dwave-cloud-client all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-greedy all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-hybrid all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-inspector all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-neal all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-networkx all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-ocean-sdk all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-optimization
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py-dwave-preprocessing
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py-dwave-samplers all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-system all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwave-tabu all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-dwavebinarycsp all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-earthpy all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-eccodes science/py-eccodes: Update to 2.43.0 2025-08-13 02:15:47 +08:00
py-emmet-core science/py-emmet-core: Fix dependency 2025-09-07 20:07:58 -07:00
py-esda
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py-fresnel
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py-gemmi
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py-geolinks
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py-geomet
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py-geometer
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py-geometric all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-gpaw all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-gsd
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py-h5json
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py-h5netcdf
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py-h5py
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py-h5pyd
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py-hiphive all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-hoomd-blue
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py-icet all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-inequality all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-ipygany
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py-jupyter_jsmol
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py-kim-query
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py-kimpy science/py-kimpy: update 2.1.1 → 2.1.3 2025-09-06 00:19:00 -07:00
py-kinematics
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py-kliff all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-kpLib all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-liac-arff
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py-libgetar
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py-libpysal
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py-lifelines all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-mdp
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py-mercantile
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py-meshio
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py-mmcif
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py-mmtf-python
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py-molmod
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py-mp-api all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-mpcontribs-client all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-mplhep all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-mplhep-data
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py-mrchem
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py-ncrystal science/{,py-}ncrystal: update 4.2.6 → 4.2.8 2025-08-07 07:12:32 -07:00
py-netCDF4
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py-netcdf-flattener
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py-nglview
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py-nibabel
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py-obspy science/py-obspy: Fix build 2025-09-11 02:45:51 +00:00
py-oddt
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py-openEMS
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py-openbabel
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py-openpiv all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-optking all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-paida
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py-paramz
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py-penaltymodel all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-periodictable
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py-phono3py all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-phonopy all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-pnetcdf science/pnetcdf: Update to 1.14.1 2025-09-08 07:03:19 +08:00
py-pupynere
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py-py3Dmol
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py-pyaixi
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py-pyberny
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py-pycsw */*: switch dependency from devel/py-lxml5 to devel/py-lxml 2025-09-15 22:55:40 +09:00
py-pydicom
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py-pygeodesy
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py-pygeometa */*: switch dependency from devel/py-lxml5 to devel/py-lxml 2025-09-15 22:55:40 +09:00
py-pygmo2 all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-pyked
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py-pymatgen all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-pymatgen-analysis-alloys all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-pymbd
…
py-pymol
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py-pyosf
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py-pyphot
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py-pyprecice
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py-pyqubo all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-pyscf
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py-pyteomics */*: switch dependency from devel/py-lxml5 to devel/py-lxml 2025-09-15 22:55:40 +09:00
py-qcelemental all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-qcengine all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-qiskit science/py-qiskit: Update to 2.1.2 2025-09-12 00:41:47 +00:00
py-qspin
…
py-quantities
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py-rmf
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py-rmsd
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py-ruffus
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py-sarpy */*: switch dependency from devel/py-lxml5 to devel/py-lxml 2025-09-15 22:55:40 +09:00
py-scikit-fuzzy all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-scikit-learn
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py-scikit-optimize
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py-scikit-sparse */*: chase the upgrade to SuiteSparse 2025-08-01 23:08:37 +02:00
py-scimath
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py-scipy
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py-scoria
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py-sdf all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-seekpath
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py-segregation all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
py-segyio
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py-signac
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py-sklearn-pandas
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py-skrebate
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py-spaghetti
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py-spglib
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py-symfc
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py-tensorflow
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py-thewalrus
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py-tobler
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py-trainstation
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py-trx-python
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py-tweedledum
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py-vedo
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py-veusz
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py-xbout all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
pybrain
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pynn
…
q
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qbox
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qcl
…
qiskit-aer *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
qmcpack
…
qt6-quick3dphysics Qt6: Update to 6.9.2 2025-08-28 01:06:27 -04:00
quantum-espresso
…
quantum-espresso-pseudopotentials
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quantum-jet
…
qwalk
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rdkit all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
rmf
…
rubygem-ai4r
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rubygem-cdo
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rubygem-rgeo
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rubygem-rgeo-geojson
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rubygem-rgeo-proj4
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rubygem-rgeo-shapefile
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rubygem-ruby-netcdf
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salome-configuration
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salome-kernel
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scidavis
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sciplot
…
seacas *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
segyio
…
serac
…
shelxle
…
siconos */*: chase the upgrade to SuiteSparse 2025-08-01 23:08:37 +02:00
siesta
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sigrok-cli
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sigrok-firmware
…
sigrok-firmware-fx2lafw
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sigrok-firmware-utils
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silo
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simbody
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simgrid
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simint
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simlib
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simple-dftd3
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simsmith
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sirius
…
smoldyn science/smoldyn: update 2.74 → 2.75 2025-08-23 01:22:30 -07:00
sparta
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spglib
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spheral
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step KDE: Update KDE Gear to 25.08.1 2025-09-13 15:45:52 +03:00
sz3 science/sz3: Update to 3.3.0 2025-09-08 07:03:20 +08:00
tblite
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teem
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tfel
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tfel-edf
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thermofun
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tinker science/tinker: Release was re-rolled 2025-08-23 01:22:30 -07:00
trilinos */*: chase the upgrade to SuiteSparse 2025-08-01 23:08:37 +02:00
ttk all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
tweedledum
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udunits
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ukrmol+
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v_sim all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
vipster *: Bump PORTREVISION for devel/libfmt update {fmt.dev} 2025-08-10 21:02:47 +02:00
vmd
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voro++
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votca */*: switch dependency from devel/py-lxml5 to devel/py-lxml 2025-09-15 22:55:40 +09:00
wannier90
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wwplot all: bump PORTREVISION after updating graphics/libyuv 2025-08-31 12:30:51 +02:00
wxmacmolplt
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xcfun
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xcrysden
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xdrawchem
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xtb
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yoda
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zotero
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zx
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Makefile
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